Latex

LaTeX is a high-quality typesetting system, available as free software. It includes features designed for the production of technical and scientific documentation, and is the de-facto-standard for the communication and publication of scientific documents.

There is a couple of online webpages that allow you to create manuscripts, including Overleaf and Papeeria. Both provide a lot of templates (e.g., for APA6 style) that permit formatting your document in accordance with the requirements of journals. Many journals (e.g., Scientific reports) even provide their own template.

Publishers accepting LaTeX submissions

Elsevier: supposedly accepted (https://www.elsevier.com/authors/author-schemas/latex-instructions)
Springer-Nature: incoherent (it is sure that, e.g., most Nature publications, Springer book chapters, etc.)
APA: unclear, rather not (not mentioned on web page)
PLoS: accepted (https://journals.plos.org/plosone/s/latex)
Frontiers: accepted (https://zendesk.frontiersin.org/hc/en-us/articles/201721041-How-do-I-submit-LaTeX-created-files-)
Oxford University Press: not accepted (.doc or .rtf only; https://academic.oup.com/cercor/pages/Instructions_For_Authors)
MIT Press (e.g., JOCN): unclear, rather not (not mentioned on web page)
PNAS: accepted (http://www.pnas.org/page/authors/submission)
Society for Neuroscience: accepted (http://www.jneurosci.org/content/submitting-manuscript)
Mary Ann Liebert: not accepted (.doc only; http://home.liebertpub.com/publications/brain-connectivity/389/for-authors)